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B6db families: 2.6.1.19.b

2.6.1.19 b
Activity 2.6.1.19
Description 4-aminobutyrate aminotransferase. (family b)
Notes The gene from Pseudomonas putida has been tentatively assigned to delta-aminovalerate aminotransferase (2.6.1.48); however, the same gene has been included in this family based on its strict similarity to functionally validated GABA transaminases and (ii) on the known ability of GABA transaminases to use 5-aminovalerate as a substrate.
PDB 1SFF;
PLP Fold Type I
PLP-dependent Domain
Domain alignment
Domain hmm
Fold type I

Number of sequences
20
Sequences in seed alignment
BacteriaNP_823759 (Streptomyces avermitilis ); AAP24358 (Bacillus anthracis); ZP_00086389.1 (Pseudomonas fluorescens ); ZP_00092384 (Azotobacter vinelandii); GABT_BACSU (Bacillus subtilis); AAQ61587 (Chromobacterium violaceum ); GABT_MYCTU (Mycobacterium tuberculosis); CAE14640 (Photorhabdus luminescens); AF299291_2 (Pseudomonas putida); ZP_00024114 (Ralstonia metallidurans); AAK21246 (Rhizobium leguminosarum); ZP_00059063 (Thermobifida fusca); NP_629805 (Streptomyces coelicolor); ZP_00011871 (Rhodopseudomonas palustris); H97075 (Clostridium acetobutylicum); G83773 (Bacillus halodurans); ZP_00017910 (Chloroflexus aurantiacus); GABT_ECOLI (Escherichia coli); ZP_00095173 (Novosphingobium aromaticivorans); GOAG_ECOLI (Escherichia coli);

DISPLAY: Fasta format, alignment, hmm, hmm_local


Reference sequence GABT_ECOLI
Domain interval 26-361
Catalytic site 268 K
 
References Articles on 2.6.1.19.b
last changed 2009/06/30 19:23

B6db families