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B6db families: 2.6.1.1.c

2.6.1.1 c
Activity 2.6.1.1
Description Aspartate aminotransferase. (family c)
Notes This compact subfamily includes aspartate aminotransferases from proteobacteria.
PDB 1ARS;
PLP Fold Type I
PLP-dependent Domain
Domain alignment
Domain hmm
Fold type I

Number of sequences
11
Sequences in seed alignment
BacteriaNP_245558.1 (Pasteurella multocida); NP_717940 (Shewanella oneidensis); ZP_01167586 (Oceanospirillum sp. MED92); YP_001334621 (Klebsiella pneumoniae); NP_405003.1 (Yersinia pestis); CAA04961 (Pseudoalteromonas haloplanktis ); AAT_ECOLI (Escherichia coli); YP_927608 (Shewanella amazonensis SB2B); AAT_SALTI (Salmonella typhi); AAF94452.1 (Vibrio cholerae); AAZ26092 (Colwellia psychrerythraea);

DISPLAY: Fasta format, alignment, hmm, hmm_local


Reference sequence AAT_ECOLI
Domain interval 26-392
Catalytic site 246 K
 
References
 Birolo, L.; Tutino, M. L.; Fontanella, B.; Gerday, C.; Mainolfi, K.; Pascarella, S.; Sannia, G.; Vinci, F.; Marino, G. (2000) Aspartate aminotransferase from the Antarctic bacterium Pseudoalteromonas haloplanktis TAC 125. Cloning, expression, properties, and molecular modelling Eur J Biochem 267 2790-802.

 Kondo K, Wakabayashi S, Yagi T, Kagamiyama H. (1984) The complete amino acid sequence of aspartate aminotransferase from Escherichia coli: sequence comparison with pig isoenzymes Biochem Biophys Res Commun 122 62-7.

Articles on 2.6.1.1.c
last changed 2007/10/23 14:07

B6db families