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B6db families: b
Description LL-diaminopimelate aminotransferase (family b)
Notes This family includes only enzymes from methanococci. The sequences are only loosely related to those in family (LL-DAP aminotransferases from other Archaea, plants and eubacteria).
PLP Fold Type I
PLP-dependent Domain
Domain alignment
Domain hmm
Fold type I

Number of sequences 4
Sequences in seed alignment
ArchaeaYP_001323358 (Methanococcus vannielii SB); Y1527_METMP (Methanococcus maripaludis); YP_003707726 (Methanococcus voltae A3); Y1391_METJA (Methanocaldococcus jannaschii);

DISPLAY: Fasta format, alignment, hmm, hmm_local

Reference sequence Y1391_METJA
Domain interval 44-388
Catalytic site 251 K
 Liu Y, White RH, Whitman WB. (2010) Methanococci use the diaminopimelate aminotransferase (DapL) pathway for lysine biosynthesis J Bacteriol 192 3304-10.

Articles on
last changed 2010/12/06 16:02

B6db families