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B6db families:
Description UDP-4-amino-4-deoxy-L-arabinose aminotransferase
Notes A small family composed of proteins from proteobacteria.
PLP Fold Type I
PLP-dependent Domain
Domain alignment
Domain hmm
Fold type I

Number of sequences 9
Sequences in seed alignment
BacteriaNP_416756 (Escherichia coli); CAE15034 (Photorhabdus luminescens); ZP_00266869 (Pseudomonas fluorescens); YP_455525 (Sodalis glossinidius str. 'morsitans'); NP_252242 (Pseudomonas aeruginosa); NP_461239 (Salmonella typhimurium LT2); NP_993538 (Yersinia pestis); YP_001143037 (Aeromonas salmonicida); YP_051236 (Erwinia carotovora);

DISPLAY: Fasta format, alignment, hmm, hmm_local

Reference sequence NP_461239
Domain interval 16-380
Catalytic site 188 K
 Breazeale, S.D.; Ribeiro, A.A.; Raetz, C.R. (2003) Origin of lipid A species modified with 4-amino-4-deoxy-L-arabinose in polymyxin-resistant mutants of Escherichia coli. An aminotransferase (ArnB) that generates UDP-4-amino-4-deoxyl-L-arabinose J Biol Chem 278 24731-9.

 Noland, B.W., Newman, J.M.; Hendle, J.; Badger J.; Christopher, J.A.; Tresser, J.; Buchanan, M.D.; Wright, T.A.; Rutter, M.E.; Sanderson, W.E.; Muller-Dieckmann, H.J.; Gajiwala, K.S.; Buchanan, S.G. (2002) Structural studies of Salmonella typhimurium ArnB (PmrH) aminotransferase: a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme Structure (Camb) 10 1569-80.

Articles on
last changed 2014/02/19 12:12

B6db families