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B6db families: a
Description Lysine decarboxylase (family a)
Notes Family built around three functionally validated enzymes from leguminosae.
These are Fold-type III sequences, very closely related to those in family 4.1.17_1 (ornithine decarboxylases).
PLP Fold Type III
PLP-dependent Domain
Domain alignment
Domain hmm
Fold type III

Number of sequences
Sequences in seed alignment
ViridiplantaeXP_003603845 (Medicago truncatula); BAK32800 (Sophora flavescens); NP_001236340 (Glycine max); BAK32801 (Echinosophora koreensis); XP_004500902 (Cicer arietinum); ESW08125 (Phaseolus vulgaris); BAK32797 (Lupinus angustifolius); XP_020218427 (Cajanus cajan); ESW08124 (Phaseolus vulgaris); XP_016165417 (Arachis ipaensis);

DISPLAY: Fasta format, alignment, hmm, hmm_local

Reference sequence BAK32800
Domain interval 66-422
Catalytic site 91 K
 Bunsupa S, Katayama K, Ikeura E, Oikawa A, Toyooka K, Saito K, Yamazaki M. (2012) Lysine decarboxylase catalyzes the first step of quinolizidine alkaloid biosynthesis and coevolved with alkaloid production in leguminosae. Plant Cell. 24 1202-16.

Articles on
last changed 2018/05/03 15:58

B6db families