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B6db families: 4.1.1.86

4.1.1.86
Activity 4.1.1.86
Description Diaminobutyrate decarboxylase
Notes Bacterial sequences. In some organisms, similar sequences are part of a multidomain gene product that also includes EC 2.6.1.76, diaminobutyrateó2-oxoglutarate transaminase.
PDB 2QMA;
PLP Fold Type I
PLP-dependent Domain
Domain alignment
Domain hmm
Fold type I

Number of sequences
13
Sequences in seed alignment
BacteriaYP_078383 (Bacillus licheniformis); YP_050339 (Erwinia carotovora); Q43908 (Acinetobacter baumannii); YP_088019 (Mannheimia succiniciproducens); AAP95639 (Haemophilus ducreyi); BAA84548 (Enterobacter aerogenes); YP_001486264 (Bacillus pumilus); 2QMA (Vibrio parahaemolyticus); ZP_01900756 (Moritella sp. PE36); YP_001478647 (Serratia proteamaculans); JC5880 (Haemophilus influenzae); ZP_00122875 (Haemophilus somnus);
ViridiplantaeYP_323346 (Anabaena variabilis ATCC 29413);

DISPLAY: Fasta format, alignment, hmm, hmm_local


Reference sequence JC5880
Domain interval 50-430
Catalytic site 320 K
 
References
 Yamamoto, S.; Mutoh, N.; Tsuzuki, D.; Ikai, H.; Nakao, H.; Shinoda, S.; Narimatsu, S.; Miyoshi, S.I. (2000) Cloning and characterization of the ddc homolog encoding L-2,4-diaminobutyrate decarboxylase in Enterobacter aerogenes Biol Pharm Bull 23 649-53.

 Ikai, H.; Yamamoto, S. (1996) Sequence analysis of the gene encoding a novel L-2,4-diaminobutyrate decarboxylase of Acinetobacter baumannii: similarity to the group II amino acid decarboxylases Arch Microbiol 166 128-31.

Articles on 4.1.1.86
last changed 2009/06/30 14:40

B6db families