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B6db families: 4.1.3.38.a

4.1.3.38 a
Activity 4.1.3.38
Description 4-amino-4-deoxychorismate lyase (family a)
Notes A family composed solely of bacterial enzymes, and based on the validated sequences from E. coli and Streptomyces sp.
PDB 1ET0;
PLP Fold Type IV
PLP-dependent Domain
Domain alignment
Domain hmm
Fold type IV

Number of sequences 26
Sequences in seed alignment
BacteriaZP_00089659 (Azotobacter vinelandii); WP_012368972 (Exiguobacterium sibiricum); YP_121450 (Nocardia farcinica IFM 10152); CAE15204 (Photorhabdus luminescens); NP_455691 (Salmonella enterica subsp. enterica serovar Typhi); ZP_01892620 (Marinobacter algicola DG893); WP_005159049 (Amycolatopsis azurea); CAB11852 (Bacillus subtilis); ZP_05032042 (Brevundimonas sp. BAL3); NP_903080 (Chromobacterium violaceum); WP_036160360 (Lysinibacillus sphaericus); NP_251654 (Pseudomonas aeruginosa); NP_718200 (Shewanella oneidensis MR-1); NP_798430 (Vibrio parahaemolyticus); ACM10598 (Bacillus cereus); WP_022973325 (Xanthomonas sp. M97); AAQ82550 (Streptomyces sp. FR-008); NP_405184 (Yersinia pestis); NP_744071 (Pseudomonas putida ); PABC_VIBCH (Vibrio cholerae); ZP_03842103 (Proteus mirabilis); YP_177757 (Mycobacterium tuberculosis H37Rv); WP_009156728 (Saccharomonospora marina); ZP_00128240 (Pseudomonas syringae); T12054 (Vibrio harveyi); PABC_ECOLI (Escherichia coli);

DISPLAY: Fasta format, alignment, hmm, hmm_local


Reference sequence PABC_ECOLI
Domain interval 37-261
Catalytic site 140 K
 
References
 Chim N, Habel JE, Johnston JM, Krieger I, Miallau L, Sankaranarayanan R, Morse RP, Bruning J, Swanson S, Kim H, Kim CY, Li H, Bulloch EM, Payne RJ, Manos-Turvey A, Hung LW, Baker EN, Lott JS, James MN, Terwilliger TC, Eisenberg DS, Sacchettini JC, Goulding CW. (2011) The TB Structural Genomics Consortium: a decade of progress Tuberculosis (Edinb) 91 155-72.

 Schadt HS, Schadt S, Oldach F, Süssmuth RD (2009) 2-Amino-2-deoxyisochorismate is a key intermediate in Bacillus subtilis p-aminobenzoic acid biosynthesis. J Am Chem Soc 131 3481-3.

 Zhang Y, Bai L, Deng Z. (2009) Functional characterization of the first two actinomycete 4-amino-4-deoxychorismate lyase genes Microbiology 155 2450-9.

 Green, J. M.; Nichols, B. P. (1991) p-Aminobenzoate biosynthesis in Escherichia coli. Purification of aminodeoxychorismate lyase and cloning of pabC J Biol Chem 266 12971-5.

Articles on 4.1.3.38.a
last changed 2014/02/25 11:18

B6db families