Activities | Families | Sequences | Fold types | References | Help
B6db families: a
Description D-serine ammonia-lyase (family a)
Notes A distinct family of fold-type II proteins, based on functionally validated sequences from from proteobacteria.
Sequences are only distantly related to those of other lyases such as (diaminopropionate ammonia-lyase) and (L-Thr ammonia-lyase).

D-serine ammonia lyase from E. coli is monomeric.

PLP Fold Type II
PLP-dependent Domain
Domain alignment
Domain hmm
Fold type II

Number of sequences 14
Sequences in seed alignment
BacteriaSDHD_PSEAE (Pseudomonas aeruginosa PAO1); ZP_00097990 (Desulfitobacterium hafniense); CAD03191 (Salmonella enterica); NP_786154 (Lactobacillus plantarum); C82406 (Vibrio cholerae ); BAB05481 (Bacillus halodurans); SDHD_BACSU (Bacillus subtilis); ZP_00123660 (Haemophilus somnus 129PT); NP_929236 (Photorhabdus luminescens); 3R0Z_A (Salmonella Typhimurium); ZP_00223525 (Burkholderia cepacia); SDHD_ECOLI (Escherichia coli); WP_027080224 (Luteimonas mephitis); NP_603450 (Fusobacterium nucleatum);

DISPLAY: Fasta format, alignment, hmm, hmm_local

Reference sequence SDHD_ECOLI
Domain interval 72-411
Catalytic site 118 K
References Articles on
last changed 2016/10/05 16:44

B6db families