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B6db families: b
Description Alanine--glyoxylate aminotransferase (family b)
Notes The validated enzyme (from T. litoralis) used to build this family is an archaeal protein not closely related to the eukariotic enzymes with alanine-glyoxylate aminotransferase activity.
PLP Fold Type I
PLP-dependent Domain
Domain alignment
Domain hmm
Fold type I

Number of sequences
Sequences in seed alignment
ArchaeaYP_002428362 (Desulfurococcus kamchatkensis 1221n); BAB40321 (Thermococcus litoralis); YP_006402307 (Desulfurococcus fermentans DSM 16532); YP_005842545 (Fervidicoccus fontis Kam940); YP_004176177 (Desulfurococcus mucosus DSM 2162); AHF80561 (Thermococcus sp. ES1); YP_004071325 (Thermococcus barophilus MP); YP_002307331 (Thermococcus onnurineus NA1);

DISPLAY: Fasta format, alignment, hmm, hmm_local

Reference sequence BAB40321
Domain interval 34-397
Catalytic site 247 K
 Sakuraba H, Yoneda K, Takeuchi K, Tsuge H, Katunuma N, Ohshima T. (2008) Structure of an archaeal alanine:glyoxylate aminotransferase Acta Crystallogr D Biol Crystallogr 64 696-9.

 Sakuraba, H.; Kawakami, R.; Takahashi, H.; Ohshima, T. (2004) Novel archaeal alanine:glyoxylate aminotransferase from Thermococcus litoralis J Bacteriol 186 15292154.

Articles on
last changed 2009/03/11 13:08

B6db families