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B6db families: 4.1.1.18.a

4.1.1.18 a
Activity 4.1.1.18
Description Lysine decarboxylase. (family a)
Notes Family built around three functionally validated enzymes from plants.
These are Fold-type III sequences, related to those in family 4.1.17_1 (ornithine decarboxylases) and 4.1.19_1 (Arginine decarboxylases).
PLP Fold Type III
PLP-dependent Domain
Domain alignment
Domain hmm
Fold type III

Number of sequences
10
Sequences in seed alignment
ViridiplantaeBAK32797 (Lupinus angustifolius); BAK32801 (Echinosophora koreensis); ESW08124 (Phaseolus vulgaris); EOY15149 (Theobroma cacao); NP_001236340 (Glycine max); XP_004500902 (Cicer arietinum); XP_003603845 (Medicago truncatula); XP_002307756 (Populus trichocarpa); ESW08125 (Phaseolus vulgaris); BAK32800 (Sophora flavescens);

DISPLAY: Fasta format, alignment, hmm, hmm_local


Reference sequence BAK32800
Domain interval 66-422
Catalytic site 91 K
 
References
 Bunsupa S, Katayama K, Ikeura E, Oikawa A, Toyooka K, Saito K, Yamazaki M. (2012) Lysine decarboxylase catalyzes the first step of quinolizidine alkaloid biosynthesis and coevolved with alkaloid production in leguminosae. Plant Cell. 24 1202-16.

Articles on 4.1.1.18.a
last changed 2014/07/11 11:18

B6db families