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B6db families: a
Description Lysine decarboxylase (family a)
Notes Family built around three functionally validated enzymes from leguminosae.
These are Fold-type III sequences, very closely related to those in family 4.1.17_1 (ornithine decarboxylases).
PLP Fold Type III
PLP-dependent Domain
Domain alignment
Domain hmm
Fold type III

Number of sequences 10
Sequences in seed alignment
ViridiplantaeBAK32801 (Echinosophora koreensis); ESW08124 (Phaseolus vulgaris); NP_001236340 (Glycine max); ESW08125 (Phaseolus vulgaris); XP_016165417 (Arachis ipaensis); XP_020218427 (Cajanus cajan); BAK32797 (Lupinus angustifolius); XP_003603845 (Medicago truncatula); XP_004500902 (Cicer arietinum); BAK32800 (Sophora flavescens);

DISPLAY: Fasta format, alignment, hmm, hmm_local

Reference sequence BAK32800
Domain interval 66-422
Catalytic site 91 K
 Bunsupa S, Katayama K, Ikeura E, Oikawa A, Toyooka K, Saito K, Yamazaki M. (2012) Lysine decarboxylase catalyzes the first step of quinolizidine alkaloid biosynthesis and coevolved with alkaloid production in leguminosae. Plant Cell. 24 1202-16.

Articles on
last changed 2018/05/03 15:58

B6db families