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B6db families: c
Description Lysine decarboxylase (family c)
Notes Family of Fold-type I enzymes, distinct from and similar to Diaminobutyrate decarboxylase.
PLP Fold Type I
PLP-dependent Domain
Domain alignment
Domain hmm
Fold type I

Number of sequences
Sequences in seed alignment
BacteriaYP_001159373 (Salinispora tropica CNB-440); YP_003654041 (Thermobispora bispora DSM 43833); NP_627012 (Streptomyces coelicolor A3(2)); YP_004405750 (Verrucosispora maris AB-18-032); YP_003115000 (Catenulispora acidiphila DSM 44928); WP_018531714 (Streptomyces sp. HmicA12); YP_003491360 (Streptomyces scabiei 87.22); NP_405115 (Yersinia pestis CO92); WP_020542450 (Nonomuraea coxensis); WP_007461035 (Micromonospora lupini); CBA23304 (Erwinia amylovora CFBP1430);

DISPLAY: Fasta format, alignment, hmm, hmm_local

Reference sequence NP_627012
Domain interval 49-403
Catalytic site 293 K
 Salomone-Stagni M, Bartho JD, Polsinelli I, Bellini D, Walsh MA, Demitri N, Benini S (2018) A complete structural characterization of the desferrioxamine E biosynthetic pathway from the fire blight pathogen Erwinia amylovora J Struct Biol S1047-8477 30029-7.

 Burrell M, Hanfrey CC, Kinch LN, Elliott KA, Michael AJ. (2012) Evolution of a novel lysine decarboxylase in siderophore biosynthesis. Mol Microbiol 485 1365-2958.

Articles on
last changed 2018/02/19 10:03

B6db families