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B6db families:
Description Tryptophan synthase (indole-salvaging)
Notes The family comprises archaeal, bacterial and plant enzymes.
It is strictly related to family (tryptophan synthase, beta subunit).

A distinctive residue of this family is Glu338 (in the S sulfataricus reference sequence, WP_010923209)

PLP Fold Type II
PLP-dependent Domain
Domain alignment
Domain hmm
Fold type II

Number of sequences 29
Sequences in seed alignment
ArchaeaWP_010923209 (Sulfolobus solfataricus); TRB2_METTH (Methanobacterium thermoautotrophicum); Q9Y9H2 (Aeropyrum pernix); TRB2_ARCFU (Archaeoglobus fulgidus); TRPB_THEAC (Thermoplasma acidophilum); TRPB_PYRHO (Pyrococcus horikoshii); TRB2_PYRAB (Pyrococcus abyssi); TRPB2_THEKO (Thermococcus kodakarensis KOD1);
BacteriaTRB2_AQUAE (Aquifex aeolicus); WP_068548903 (Thermosulfidibacter takaii); WP_093394463 (Thermodesulforhabdus norvegica); YP_002247936 (Thermodesulfovibrio yellowstonii DSM 11347); WP_011422796 (Anaeromyxobacter dehalogenans); WP_011712042 (Magnetococcus marinus); WP_012660703 (Caldicellulosiruptor bescii); YP_427066 (Rhodospirillum rubrum ATCC 11170); WP_015925868 (Clostridium cellulolyticum); YP_887618 (Mycobacterium smegmatis str. MC2 155); WP_004081366 (Thermotoga maritima);
ViridiplantaeXP_010032600 (Eucalyptus grandis); XP_004253077 (Solanum lycopersicum); XP_017438609 (Vigna angularis); NP_198669 (Arabidopsis thaliana); XP_001761408 (Physcomitrella patens); XP_016466450 (Nicotiana tabacum); AQL04832 (Zea mays); XP_010435761 (Camelina sativa); EFJ35538 (Selaginella moellendorffii); XP_021760050 (Chenopodium quinoa);

DISPLAY: Fasta format, alignment, hmm, hmm_local

Reference sequence WP_010923209
Domain interval 72-413
Catalytic site 111 K
References Articles on
last changed 2018/01/31 19:22

B6db families