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B6db families: 4.3.1.18.a

4.3.1.18 a
Activity 4.3.1.18
Description D-serine ammonia-lyase (family a)
Notes A distinct family of fold-type II proteins, based on functionally validated sequences from from proteobacteria.
Sequences are only distantly related to those of other lyases such as 4.3.1.15 (diaminopropionate ammonia-lyase) and 4.3.1.19 (L-Thr ammonia-lyase).

D-serine ammonia lyase from E. coli is monomeric.

PDB 3R0Z;
PLP Fold Type II
PLP-dependent Domain
Domain alignment
Domain hmm
Fold type II

Number of sequences
14
Sequences in seed alignment
BacteriaNP_929236 (Photorhabdus luminescens); CAD03191 (Salmonella enterica); C82406 (Vibrio cholerae ); NP_603450 (Fusobacterium nucleatum); SDHD_PSEAE (Pseudomonas aeruginosa PAO1); ZP_00097990 (Desulfitobacterium hafniense); NP_786154 (Lactobacillus plantarum); 3R0Z_A (Salmonella Typhimurium); SDHD_ECOLI (Escherichia coli); ZP_00123660 (Haemophilus somnus 129PT); BAB05481 (Bacillus halodurans); SDHD_BACSU (Bacillus subtilis); ZP_00223525 (Burkholderia cepacia); WP_027080224 (Luteimonas mephitis);

DISPLAY: Fasta format, alignment, hmm, hmm_local


Reference sequence SDHD_ECOLI
Domain interval 72-411
Catalytic site 118 K
 
References Articles on 4.3.1.18.a
last changed 2016/10/05 16:44

B6db families