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B6db families: 4.4.1.8.c
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4.4.1.8 c
Activity 4.4.1.8
Description Cystathionine beta-lyase. (family c)
Notes A family composed by eukaryotic sequences (from planta and fungi) closely related to cystathionine gamma-lyases (family 4.4.1.1).
PDB 1IBJ;
PLP Fold Type I
PLP-dependent Domain
Domain alignment
Domain hmm		Fold type I
Number of sequences
12
Sequences in seed alignment
FungiAAB03241 (Emericella nidulans); EAA56719 (Magnaporthe grisea); EAA68828 (Gibberella zeae); ABM92783 (Hansenula polymorpha); AF211176 (Botryotinia fuckeliana); EAL00658 (Candida albicans ); AF401237 (Neurospora crassa);
ViridiplantaeXP_001764951 (Physcomitrella patens); AF082890 (Solanum tuberosum); METC_ARATH (Arabidopsis thaliana); CAL55420 (Ostreococcus tauri); BAA95820 (Oryza sativa );

DISPLAY: Fasta format, alignment, hmm, hmm_local
Reference sequence METC_ARATH
Domain interval 88-460
Catalytic site 278 K
 
References
 Gidijala L, van der Klei IJ, Veenhuis M, Kiel JA. (2007) Reprogramming Hansenula polymorpha for penicillin production: expression of the Penicillium chrysogenum pcl gene FEMS Yeast Res 7 1160-7.

 Breitinger, U.; Clausen, T.; Ehlert, S.; Huber, R.; Laber, B.; Schmidt, F.; Pohl, E.; Messerschmidt, A. (2001) The three-dimensional structure of cystathionine beta-lyase from Arabidopsis and its substrate specificity Plant Physiol 126 631-42.

 Sienko, M.; Paszewski, A. (1999) The metG gene of Aspergillus nidulans encoding cystathionine beta-lyase: cloning and analysis Curr Genet 35 638-46.

 Ravanel, S.; Job, D.; Douce, R. (1996) Purification and properties of cystathionine beta-lyase from Arabidopsis thaliana overexpressed in Escherichia coli Biochem J 320 383-92.

Articles on 4.4.1.8.c
last changed 2008/04/14 19:33

B6db families