B6db families : 4_1_1

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4.1.1.86

Activity

4.1.1.86

Description

Diaminobutyrate decarboxylase

Notes

Bacterial sequences. In some organisms, such as Vibrio Cholerae, similar sequences are part of a multidomain gene product that also includes EC 2.6.1.76, diaminobutyrate—2-oxoglutarate transaminase.

PDB

2QMA;

PLP Fold Type

PLP-dependent Domain

Domain alignment
Domain hmm

Fold type I

Number of sequences

Sequences in seed alignment

Bacteria

YP_001478647 (Serratia proteamaculans); Q43908 (Acinetobacter baumannii); YP_050339 (Erwinia carotovora); ZP_00122875 (Haemophilus somnus); JC5880 (Haemophilus influenzae); YP_001486264 (Bacillus pumilus); ZP_01900756 (Moritella sp. PE36); CRZ46566 (Vibrio cholerae); AAP95639 (Haemophilus ducreyi); BAA84548 (Enterobacter aerogenes); YP_078383 (Bacillus licheniformis); YP_088019 (Mannheimia succiniciproducens); 2QMA (Vibrio parahaemolyticus);

Viridiplantae

YP_323346 (Anabaena variabilis ATCC 29413);

DISPLAY: Fasta format, alignment, hmm, hmm_local

Reference sequence

JC5880

Domain interval

50-430

Catalytic site

320 K

References

Yamamoto, S.; Mutoh, N.; Tsuzuki, D.; Ikai, H.; Nakao, H.; Shinoda, S.; Narimatsu, S.; Miyoshi, S.I. (2000) Cloning and characterization of the ddc homolog encoding L-2,4-diaminobutyrate decarboxylase in Enterobacter aerogenes Biol Pharm Bull 23 649-53.

Ikai, H.; Yamamoto, S. (1996) Sequence analysis of the gene encoding a novel L-2,4-diaminobutyrate decarboxylase of Acinetobacter baumannii: similarity to the group II amino acid decarboxylases Arch Microbiol 166 128-31.

Articles on 4.1.1.86

last changed

2019/05/10 13:10